Publications

2024

• Visková, P; Istvánková, E; Rynes, J; Dzatko, S; Loja, T; Zivkovic, ML; Rigo, R; El-Khoury, R; Serrano-Chacón, I; Damha, MJ; González, C; Mergny, JL; Foldynová-Trantírková, S; Trantírek, L, 2024: In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells. NATURE COMMUNICATIONS 15(1), doi: 10.1038/s41467-024-46221-y
• Malcikova, J; Pavlova, S; Baliakas, P; Chatzikonstantinou, T; Tausch, E; Catherwood, M; Rossi, D; Soussi, T; Tichy, B; Kater, AP; Niemann, CU; Davi, F; Gaidano, G; Stilgenbauer, S; Rosenquist, R; Stamatopoulos, K; Ghia, P; Pospisilova, S, 2024: ERIC recommendations for TP53 mutation analysis in chronic lymphocytic leukemia-2024 update. LEUKEMIA 38(7), doi: 10.1038/s41375-024-02267-x
• Redmer, T; Raigel, M; Sternberg, C; Ziegler, R; Probst, C; Lindner, D; Aufinger, A; Limberger, T; Trachtova, K; Kodajova, P; Högler, S; Schlederer, M; Stoiber, S; Oberhuber, M; Bolis, M; Neubauer, HA; Miranda, S; Tomberger, M; Harbusch, NS; Alonso, IGD; Sternberg, F; Moriggl, R; Theurillat, JP; Tichy, B; Bystry, V; Persson, JL; Mathas, S; Aberger, F; Strobl, B; Pospisilova, S; Merkel, O; Egger, G; Lagger, S; Kenner, L, 2024: JUN mediates the senescence associated secretory phenotype and immune cell recruitment to prevent prostate cancer progression. MOLECULAR CANCER 23(1), doi: 10.1186/s12943-024-02022-x
• Palova, H; Das, A; Pokorna, P; Bajciova, V; Pavelka, Z; Jezova, M; Pal, K; Dimayacyac, JR; Negm, L; Stengs, L; Bianchi, V; Vejmelkova, K; Noskova, K; Jarosova, M; Mejstrikova, S; Mudry, P; Kyr, M; Merta, T; Tinka, P; Drabova, K; Aulicka, S; Jugas, R; Tabori, U; Slaby, O; Sterba, J, 2024: Precision immuno-oncology approach for four malignant tumors in siblings with constitutional mismatch repair deficiency syndrome. NPJ PRECISION ONCOLOGY 8(1), doi: 10.1038/s41698-024-00597-8
• Csordas, A; Sipos, B; Kurucova, T; Volfova, A; Zamola, F; Tichy, B; Hicks, DG, 2024: Cell Tree Rings: the structure of somatic evolution as a human aging timer. GEROSCIENCE , doi: 10.1007/s11357-023-01053-4
• HOFERKOVA, E.; SEDA, V.; KADAKOVA, S.; VERNER, J.; LOJA, T.; MATULOVA, K.; FRANCOVA, HS.; ONDROUSKOVA, E.; FILIP, D.; BLAVET, N.; BOUDNY, M.; PAVLASOVA, GM.; VECERA, J.; ONDRISOVA, L.; PAVELKOVA, P.; HLAVAC, K.; KOSTALOVA, L.; MICHAELOU, A.; POSPISILOVA, S.; DORAZILOVA, J.; CHOCHOLA, V.; JAROS, J. ; DOUBEK, M.; JAROSOVA, M.; HAMPL, A.; VOJTOVA, L.; KREN, L. ; MAYER, J.; MRAZ, M, 2024: Stromal cells engineered to express T cell factors induce robust CLL cell proliferation in vitro and in PDX co-transplantations allowing the identification of RAF inhibitors as anti-proliferative drugs. LEUKEMIA 38(8), p. 1699 - 13, doi: 10.1038/s41375-024-02284-w; FULL TEXT

2023

• Deissová, T; Zapletalová, M; Kunovsky, L; Kroupa, R; Grolich, T; Kala, Z; Linhartová, PB; Lochman, J, 2023: 16S rRNA gene primer choice impacts off-target amplification in human gastrointestinal tract biopsies and microbiome profiling. SCIENTIFIC REPORTS 13(1), doi: 10.1038/s41598-023-39575-8
• Baird, SJE; Hiadlovská, Z; Daniszová, K; Piálek, J; Macholán, M, 2023: A gene copy number arms race in action: X,Y-chromosome transmission distortion across a species barrier. EVOLUTION 77(6), doi: 10.1093/evolut/qpad051
• Kulkarni, A; Jozefiaková, J; Bhide, K; Mochnacová, E; Bhide, M, 2023: Differential transcriptome response of blood brain barrier spheroids to neuroinvasive Neisseria and Borrelia. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 13, doi: 10.3389/fcimb.2023.1326578
• Ilík, V; Kreisinger, J; Modry, D; Schwarz, EM; Tagg, N; Mbohli, D; Nkombou, IC; Petrzelková, KJ; Pafco, B, 2023: High diversity and sharing of strongylid nematodes in humans and great apes co-habiting an unprotected area in Cameroon. PLOS NEGLECTED TROPICAL DISEASES 17(8), doi: 10.1371/journal.pntd.0011499
• Mancikova, V; Pesova, M; Pavlova, S; Helma, R; Zavacka, K; Hejret, V; Taus, P; Hynst, J; Plevova, K; Malcikova, J; Pospisilova, S, 2023: Distinct p53 phosphorylation patterns in chronic lymphocytic leukemia patients are reflected in the activation of circumjacent pathways upon DNA damage. MOLECULAR ONCOLOGY 17(1), p. 82 - 97, doi: 10.1002/1878-0261.13337
• Bohosova, J; Kozelkova, K; Al Tukmachi, D; Trachtova, K; Naar, O; Ruckova, M; Kolarikova, E; Stanik, M; Poprach, A; Slaby, O, 2023: Long non-coding RNAs enable precise diagnosis and prediction of early relapse after nephrectomy in patients with renal cell carcinoma. JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY , doi: 10.1007/s00432-023-04700-7
• Ballonová, L; Soucek, P; Slanina, P; Réblová, K; Zapletal, O; Vlková, M; Hakl, R; Bíly, V; Grombiríková, H; Svobodová, E; Kulísková, P; Stíchová, J; Sobotková, M; Zachová, R; Hanzliková, J; Vachová, M; Králícková, P; Krcmová, I; Jesenák, M; Freiberger, T, 2023: Myeloid lineage cells evince distinct steady-state level of certain gene groups in dependence on hereditary angioedema severity. FRONTIERS IN GENETICS 14, doi: 10.3389/fgene.2023.1123914
• Atanasova, VS; Cardona, CD; Hejret, V; Tiefenbacher, A; Mair, T; Tran, L; Pfneissl, J; Draganic, K; Binder, C; Kabiljo, J; Clement, J; Woeran, K; Neudert, B; Wohlhaupter, S; Haase, A; Domazet, S; Hengstschläger, M; Mitterhauser, M; Müllauer, L; Tichy, B; Bergmann, M; Schweikert, G; Hartl, M; Dolznig, H; Egger, G, 2023: Mimicking Tumor Cell Heterogeneity of Colorectal Cancer in a Patient-derived Organoid-Fibroblast Model. CELLULAR AND MOLECULAR GASTROENTEROLOGY AND HEPATOLOGY 15(6), p. 1391 - 1419, doi: 10.1016/j.jcmgh.2023.02.014)
• Ceská, K; Papez, J; Oslejsková, H; Slaby, O; Radová, L; Loja, T; Libá, Z; Sveráková, A; Brázdil, M; Aulická, S, 2023: CCL2/MCP-1, interleukin-8, and fractalkine/CXC3CL1: Potential biomarkers of epileptogenesis and pharmacoresistance in childhood epilepsy. EUROPEAN JOURNAL OF PAEDIATRIC NEUROLOGY 46, p. 48 - 54, doi: 10.1016/j.ejpn.2023.06.001
• Schumacher, N; Thomsen, I; Brundert, F; Hejret, V; Düsterhöft, S; Tichy, B; Schmidt-Arras, D; Voss, M; Rose-John, S, 2023: EGFR stimulation enables IL-6 trans-signalling via iRhom2-dependent ADAM17 activation in mammary epithelial cells. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 1870(7), doi: 10.1016/j.bbamcr.2023.119489
• Trizuljak, J; Duben, J; Blaháková, I; Vrzalová, Z; Stano Kozubík, K; Stika, J; Radová, L; Bergerová, V; Mejstríková, S; Horínová, V; Jancálek, R; Pospísilová, S; Doubek, M, 2023: Extensive, 3.8 Mb-Sized Deletion of 22q12 in a Patient with Bilateral Schwannoma, Intellectual Disability, Sensorineural Hearing Loss, and Epilepsy. MOLECULAR SYNDROMOLOGY 14(5), p. 439 - 448, doi: 10.1159/000528744

2022

• Durinikova, A; Folta, A; Pardy, F; Svaton, J; Drncova, M; Weinbergerova, B; Cetkovsky, P; Racil, Z; Jindra, P; Szotkowski, T; Zak, P; Mayer, J; Jeziskova, I, 2022: Single and multiple point NRAS mutations in acute myeloid leukemia: a study of 327 well molecularly characterized patients. LEUKEMIA & LYMPHOMA , doi: 10.1080/10428194.2022.2116931
• Jarousek, R; Mikulova, A; Dad´ova, P; Taus, P; Kurucova, T; Plevova, K; Tichy, B; Kubala, L, 2022: Single-cell RNA sequencing analysis of T helper cell differentiation and heterogeneity. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 1869(10), doi: 10.1016/j.bbamcr.2022.119321
• Arpas, T; Jelinkova, H; Hrabovsky, S; Orsulova, M; Vrzalova, Z; Navrkalova, V; Brhelova, E; Bryjova, L; Bulikova, A; Ondrouskova, E; Sejnohova, M; Folber, F; Sedova, P; Mayer, J; Pospisilova, S; Jarosova, M; Doubek, M, 2022: Very rare near-haploid acute lymphoblastic leukemia resistant to immunotherapy and CAR-T therapy in 19-year-old male patient. CLINICAL CASE REPORTS 10(3), doi: 10.1002/ccr3.5545
• Skalnikova, M; Kozubik, KS; Trizuljak, J; Vrzalova, Z; Radova, L; Reblova, K; Holbova, R; Kurucova, T; Svozilova, H; Stika, J; Blahakova, I; Dvorackova, B; Prudkova, M; Stehlikova, O; Smida, M; Kren, L; Smejkal, P; Pospisilova, S; Doubek, M, 2022: A GP1BA Variant in a Czech Family with Monoallelic Bernard-Soulier Syndrome. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2), doi: 10.3390/ijms23020885
• Dave, Z; Blanarova, OV; Cada, S; Janovska, P; Zezula, N; Behal, M; Hanakova, K; Ganji, SR; Krejci, P; Gomoryova, K; Peschelova, H; Smida, M; Zdrahal, Z; Pavlova, S; Kotaskova, J; Pospisilova, S; Bryja, V, 2022: Lyn Phosphorylates and Controls ROR1 Surface Dynamics During Chemotaxis of CLL Cells. FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY 9, doi: 10.3389/fcell.2022.838871
• Fuzik, T; Moravcova, J; Kalynych, S; Plevka, P, 2022: Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds. JOURNAL OF VIROLOGY 96(17), doi: 10.1128/jvi.00604-22
• Ilgova, J; Vorel, J; Roudnicky, P; Skorpikova, L; Horn, M; Kasny, M, 2022: Transcriptomic and proteomic profiling of peptidase expression in Fasciola hepatica eggs developing at host´s body temperature. SCIENTIFIC REPORTS 12(1), doi: 10.1038/s41598-022-14419-z
• Wiedermannova, H; Mudry, P; Pavlicek, J; Tomaskova, H; Hladikova, A; Palova, H; Vesela, P; Slaby, O; Sterba, J, 2022: Risk factors for tumors or leukemia development in the first two years of life. BIOMEDICAL PAPERS-OLOMOUC , doi: 10.5507/bp.2022.004
• Pekar, S; Dusatkova, LP; Machackova, T; Slaby, O; Garcia, LF; Haddad, CR, 2022: Gut-content analysis in four species, combined with comparative analysis of trophic traits, suggests an araneophagous habit for the entire family Palpimanidae (Araneae). ORGANISMS DIVERSITY & EVOLUTION 22(1), p. 265 - 274, doi: 10.1007/s13127-021-00525-9
• Dolina, J; Kunovsky, L; Kroupa, R; Stary, K; Jabandziev, P; Nesporova, T; Maca, K; Andrasina, T; Marek, F; Kala, Z; Vaculova, J; Said, D; Zapletalova, M; Lochman, J; Noskova, HP; Slaby, O; Holla, LI; Lihartova, PB, 2022: Achalasia and acromegaly: co-incidence of these diseases or a new syndrome?. BIOMEDICAL PAPERS-OLOMOUC , doi: 10.5507/bp.2021.040
• Olbertova, H; Plevova, K; Pavlova, S; Malcikova, J; Kotaskova, J; Stranska, K; Spunarova, M; Trbusek, M; Navrkalova, V; Dvorackova, B; Tom, N; Pal, K; Jarosova, M; Brychtova, Y; Panovska, A; Doubek, M; Pospisilova, S, 2022: Evolution of TP53 abnormalities during CLL disease course is associated with telomere length changes. BMC CANCER 22(1), doi: 10.1186/s12885-022-09221-z
• Hrbac, T; Kopkova, A; Siegl, F; Vecera, M; Ruckova, M; Kazda, T; Jancalek, R; Hendrych, M; Hermanova, M; Vybihal, V; Fadrus, P; Smrcka, M; Sokol, F; Kubes, V; Lipina, R; Slaby, O; Kren, L; Sana, J, 2022: HLA-E and HLA-F Are Overexpressed in Glioblastoma and HLA-E Increased After Exposure to Ionizing Radiation. CANCER GENOMICS & PROTEOMICS 19(2), p. 151 - 162, doi: 10.21873/cgp.20311
• Limberger, T; Schlederer, M; Trachtova, K; Alonso, IGD; Yang, JY; Hogler, S; Sternberg, C; Bystry, V; Oppelt, J; Tichy, B; Schmeidl, M; Kodajova, P; Jager, A; Neubauer, HA; Oberhuber, M; Schmalzbauer, BS; Pospisilova, S; Dolznig, H; Wadsak, W; Culig, Z; Turner, SD; Egger, G; Lagger, S; Kenner, L, 2022: KMT2C methyltransferase domain regulated INK4A expression suppresses prostate cancer metastasis. MOLECULAR CANCER 21(1), doi: 10.1186/s12943-022-01542-8
• Bohosova, J; Kasik, M; Kubickova, A; Trachtova, K; Stanik, M; Poprach, A; Slaby, O, 2022: LncRNA PVT1 is increased in renal cell carcinoma and affects viability and migration in vitro. JOURNAL OF CLINICAL LABORATORY ANALYSIS 36(6), doi: 10.1002/jcla.24442
• Pokorna, P; Klement, GL; Vasikova, A; Kanderova, V; Jezova, M; Noskova, K; Mudry, P; Kyr, M; Merta, T; Bajciova, V; Krenova, Z; Palova, H; Valik, D; Dubska, LZ; Slaby, O; Sterba, J, 2022: Minimal Residual Disease-Guided Intermittent Dosing in Patients With Cancer: Successful Treatment of Chemoresistant Anaplastic Large Cell Lymphoma Using Intermittent Lorlatinib Dosing. JCO PRECISION ONCOLOGY 6, doi: 10.1200/PO.21.00525
• Ergir, E; Oliver-De la Cruz, J; Fernandes, S; Cassani, M; Niro, F; Pereira-Sousa, D; Vrbsky, J; Vinarsky, V; Perestrelo, AR; Debellis, D; Vadovicova, N; Uldrijan, S; Cavalieri, F; Pagliari, S; Redl, H; Ertl, P; Forte, G, 2022: Generation and maturation of human iPSC-derived 3D organotypic cardiac microtissues in long-term culture. SCIENTIFIC REPORTS 12(1), doi: 10.1038/s41598-022-22225-w
• Finstrlova, A; Maslanova, I; Blasdel Reuter, BG; Doskar, J; Gotz, F; Pantucek, R, 2022: Global Transcriptomic Analysis of Bacteriophage-Host Interactions between a Kayvirus Therapeutic Phage and Staphylococcus aureus. MICROBIOLOGY SPECTRUM 10(3), doi: 10.1128/spectrum.00123-22

2021

• Senovska, A; Drozdova, E; Vaculik, O; Pardy, F; Brzobohata, K; Fialova, D; Smerda, J; Kos, P, 2021: Cost-effective straightforward method for captured whole mitogenome sequencing of ancient DNA. FORENSIC SCIENCE INTERNATIONAL 319, doi: 10.1016/j.forsciint.2020.110638
• Kwik, M; Hainzl, S; Oppelt, J; Tichy, B; Koller, U; Bernardinelli, E; Steiner, M; Zara, G; Nofziger, C; Weis, S; Paulmichl, M; Dossena, S; Patsch, W; Soyal, SM, 2021: Selective Activation of CNS and Reference PPARGC1A Promoters Is Associated with Distinct Gene Programs Relevant for Neurodegenerative Diseases. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 22(7), doi: 10.3390/ijms22073296

2020

• Machackova, T; Vychytilova-Faltejskova, P; Souckova, K; Trachtova, K; Brchnelova, D; Svoboda, M; Kiss, I; Prochazka, V; Kala, Z; Slaby, O, 2020: MiR-215-5p Reduces Liver Metastasis in an Experimental Model of Colorectal Cancer through Regulation of ECM-Receptor Interactions and Focal Adhesion. CANCERS 12(12), doi: 10.3390/cancers12123518
• Peska, V; Matl, M; Mandakov, T; Vitales, D; Fajkus, P; Fajkus, J; Garcia, S, 2020: Human-like telomeres in Zostera marina reveal a mode of transition from the plant to the human telomeric sequences. JOURNAL OF EXPERIMENTAL BOTANY 71(19), p. 5786 - 5793, doi: 10.1093/jxb/eraa293
• Roudnicky, P; Patesil, D; Zdrahal, Z; Gelnar, M; Kasny, M, 2020: Laser capture microdissection in combination with mass spectrometry: Approach to characterization of tissue-specific proteomes ofEudiplozoon nipponicum(Monogenea, Polyopisthocotylea). PLOS ONE 15(6), doi: 10.1371/journal.pone.0231681
• Slaba, K; Noskova, H; Vesela, P; Tuckova, J; Jicinska, H; Honzik, T; Hansikova, H; Kleiblova, P; Stourac, P; Jabandziev, P; Slaby, O; Prochazkova, D, 2020: Novel Splicing Variant in the PMM2 Gene in a Patient With PMM2-CDG Syndrome Presenting With Pericardial Effusion: A Case Report. FRONTIERS IN GENETICS 11, doi: 10.3389/fgene.2020.561054
• Vozdova, M; Kubickova, S; Pal, K; Frohlich, J; Fictum, P; Rubes, J, 2020: Recurrent gene mutations detected in canine mast cell tumours by next generation sequencing. VETERINARY AND COMPARATIVE ONCOLOGY 18(4), p. 509 - 518, doi: 10.1111/vco.12572
• Vrbovska, V; Sedlacek, I; Zeman, M; Svec, P; Kovarovic, V; Sedo, O; Laichmanova, M; Doskar, J; Pantucek, R, 2020: Characterization of Staphylococcus intermedius Group Isolates Associated with Animals from Antarctica and Emended Description of Staphylococcus delphini. MICROORGANISMS 8(2), doi: 10.3390/microorganisms8020204
• Laidou, S; Alanis-Lobato, G; Pribyl, J; Rasko, T; Tichy, B; Mikulasek, K; Tsagiopoulou, M; Oppelt, J; Kastrinaki, G; Lefaki, M; Singh, M; Zink, A; Chondrogianni, N; Psomopoulos, F; Prigione, A; Ivics, Z; Pospisilova, S; Skladal, P; Izsvak, Z; Andrade-Navarro, MA; Petrakis, S, 2020: Nuclear inclusions of pathogenic ataxin-1 induce oxidative stress and perturb the protein synthesis machinery. REDOX BIOLOGY 32, doi: 10.1016/j.redox.2020.101458
• Baloun, J; Bencurova, P; Totkova, T; Kubova, H; Hermanova, M; Hendrych, M; Pail, M; Pospisilova, S; Brazdil, M, 2020: Epilepsy miRNA Profile Depends on the Age of Onset in Humans and Rats. FRONTIERS IN NEUROSCIENCE 14, doi: 10.3389/fnins.2020.00924
• Snopkova, K; Cejkova, D; Dufkova, K; Sedlacek, I; Smajs, D, 2020: Genome sequences of two Antarctic strains of Pseudomonas prosekii: insights into adaptation to extreme conditions. ARCHIVES OF MICROBIOLOGY 202(3), p. 447 - 454, doi: 10.1007/s00203-019-01755-4

2019

• Fajkus, P; Peška, V; Závodník, M; Fojtová, M; Fulnečková, J; Dobias, Š; Kilar, A; Dvořáčková, M; Zachová, D; Nečasová, I; Sims, J; Sýkorová, E; Fajkus, J, 2019: Telomerase RNAs in land plants. NUCLEIC ACIDS RESEARCH , doi: 10.1093/nar/gkz695
• Hernandez-Sanchez, M; Kotaskova, J; Rodriguez, AE; Radova, L; Tamborero, D; Abaigar, M; Plevova, K; Benito, R; Tom, N; Quijada-Alamo, M; Bikos, V; Martin, AA; Pal, K; de Coca, AG; Doubek, M; Lopez-Bigas, N; Hernandez-Rivas, JM; Pospisilova, S, 2019: CLL cells cumulate genetic aberrations prior to the first therapy even in outwardly inactive disease phase. LEUKEMIA 33(2), p. 518 - 522, doi: 10.1038/s41375-018-0255-1
• Machalkova, M; Pavlatovska, B; Michalek, J; Pruska, A; Stepka, K; Necasova, T; Radaszkiewicz, KA; Kozubek, M; Smarda, J; Preisler, J; Navratilova, J, 2019: Drug Penetration Analysis in 3D Cell Cultures Using Fiducial-Based Semiautomatic Coregistration of MALDI MSI and Immunofluorescence Images. ANALYTICAL CHEMISTRY 91(21), p. 13475 - 13484, doi: 10.1021/acs.analchem.9b02462
• Mareckova, A; Malcikova, J; Tom, N; Pal, K; Radova, L; Salek, D; Janikova, A; Moulis, M; Smardova, J; Kren, L; Mayer, J; Trbusek, M, 2019: ATM and TP53 mutations show mutual exclusivity but distinct clinical impact in mantle cell lymphoma patients. LEUKEMIA & LYMPHOMA 60(6), p. 1420 - 1428, doi: 10.1080/10428194.2018.1542144
• Wiatrek, DM; Candela, ME; Sedmik, JI; Oppelt, J; Keegan, LP; O´Connell, MA, 2019: Activation of innate immunity by mitochondrial dsRNA in mouse cells lacking p53 protein. RNA 25(6), p. 713 - 726, doi: 10.1261/rna.069625.118
• Zaprazna, K; Reblova, K; Svobodova, V; Radova, L; Bystry, V; Baloun, J; Durechova, K; Tom, N; Loja, T; Buresova, M; Stranska, K; Oltova, A; Doubek, M; Atchison, ML; Trbusek, M; Malcikova, J; Pospisilova, S, 2019: Activation-induced deaminase and its splice variants associate with trisomy 12 in chronic lymphocytic leukemia. ANNALS OF HEMATOLOGY 98(2), p. 423 - 435, doi: 10.1007/s00277-018-3520-5
• Kanova, E; Tkacova, Z; Bhide, K; Kulkarni, A; Jimenez-Munguia, I; Mertinkova, P; Drazovska, M; Tyagi, P; Bhide, M, 2019: Transcriptome analysis of human brain microvascular endothelial cells response to Neisseria meningitidis and its antigen MafA using RNA-seq. SCIENTIFIC REPORTS 9, doi: 10.1038/s41598-019-55409-y
• Oliver-De La Cruz, J; Nardone, G; Vrbsky, J; Pompeiano, A; Perestrelo, AR; Capradossi, F; Melajova, K; Filipensky, P; Forte, G, 2019: Substrate mechanics controls adipogenesis through YAP phosphorylation by dictating cell spreading. BIOMATERIALS 205, p. 64 - 80, doi: 10.1016/j.biomaterials.2019.03.009
• Patakova, P; Branska, B; Sedlar, K; Vasylkivska, M; Jureckova, K; Kolek, J; Koscova, P; Provaznik, I, 2019: Acidogenesis, solventogenesis, metabolic stress response and life cycle changes in Clostridium beijerinckii NRRL B-598 at the transcriptomic level. SCIENTIFIC REPORTS 9, doi: 10.1038/s41598-018-37679-0
• Sharaf, A; De Michele, R; Sharma, A; Fakhari, S; Obornik, M, 2019: Transcriptomic Analysis Reveals the Roles of Detoxification Systems in Response to Mercury in Chromera velia. BIOMOLECULES 9(11), doi: 10.3390/biom9110647
• Soucek, P; Reblova, K; Kramarek, M; Radova, L; Grymova, T; Hujova, P; Kovacova, T; Lexa, M; Grodecka, L; Freiberger, T, 2019: High-throughput analysis revealed mutations´ diverging effects on SMN1 exon 7 splicing. RNA BIOLOGY , doi: 10.1080/15476286.2019.1630796
• Bereshchenko, O; Lo Re, O; Nikulenkov, F; Flamini, S; Kotaskova, J; Mazza, T; Le Pannerer, MM; Buschbeck, M; Giallongo, C; Palumbo, G; Li Volti, G; Pazienza, V; Cervinek, L; Riccardi, C; Krejci, L; Pospisilova, S; Stewart, AF; Vinciguerra, M, 2019: Deficiency and haploinsufficiency of histone macroH2A1.1 in mice recapitulate hematopoietic defects of human myelodysplastic syndrome. CLINICAL EPIGENETICS 11(1), doi: 10.1186/s13148-019-0724-z
• Doubkova, M; Kozubik, KS; Radova, L; Pesova, M; Trizuljak, J; Pal, K; Svobodova, K; Reblova, K; Svozilova, H; Vrzalova, Z; Pospisilova, S; Doubek, M, 2019: A novel germline mutation of the SFTPA1 gene in familial interstitial pneumonia. HUMAN GENOME VARIATION 6, doi: 10.1038/s41439-019-0044-z

2018

• Zaprazna, K; Basu, A; Tom, N; Jha, V; Hodawadekar, S; Radova, L; Malcikova, J; Tichy, B; Pospisilova, S; Atchison, ML, 2018: Transcription factor YY1 can control AID-mediated mutagenesis in mice. EUROPEAN JOURNAL OF IMMUNOLOGY 48(2), p. 273 - 282, doi: 10.1002/eji.201747065
• Vlckova, K; Kreisinger, J; Pafco, B; Cizkova, D; Tagg, N; Hehl, AB; Modry, D, 2018: Diversity of Entamoeba spp. in African great apes and humans: an insight from Illumina MiSeq high-throughput sequencing. INTERNATIONAL JOURNAL FOR PARASITOLOGY 48(7), p. 519 - 530, doi: 10.1016/j.ijpara.2017.11.008
• Pafco, B; Cizkova, D; Kreisinger, J; Hasegawa, H; Vallo, P; Shutt, K; Todd, A; Petrzelkova, KJ; Modry, D, 2018: Metabarcoding analysis of strongylid nematode diversity in two sympatric primate species. SCIENTIFIC REPORTS 8, doi: 10.1038/s41598-018-24126-3
• Baliakas, P.; Mattsson, M.; Hadzidimitriou, A.; Minga, E.; Agathangelidis, A.; Sutton, L.; Scarfo, L.; Davis, Z.; Yan, X.; Plevova, K.; Sandberg, Y.; Vojdeman, F. J.; Tzenou, T.; Chu, C. C.; Veronese, S.; Mansouri, L.; Smedby, K. E.; Giudicelli, V.; Nguyen-Khac, F.; Panagiotidis, P.; Juliusson, G.; Anagnostopoulos, A.; Lefranc, M.; Trentin, L.; Catherwood, M.; Montillo, M.; Niemann, C. U.; Langerak, A. W.; Pospisilova, S.; Stavroyianni, N.; Chiorazzi, N.; Oscier, D.; Jelinek, D. F.; Shanafelt, T.; Darzentas, N.; Belessi, C.; Davi, F.; Ghia, P.; Rosenquist, R.; Stamatopoulos, K., 2018: No improvement in long-term survival over time for chronic lymphocytic leukemia patients in stereotyped subsets #1 and #2 treated with chemo(immuno)therapy. HAEMATOLOGICA , doi: 10.3324/haematol.2017.182634
• Liskova, P; Dudakova, L; Evans, C.J; Lopez, KER; Pontikos, N; Athanasiou, D; Jama, H; Sach, J; Skalicka, P; Stranecky, V; Kmoch, S; Thaung, C; Filipec, M; Cheetham, M.E; Davidson, A.E; Tuft, S.J; Hardcastle, A.J, 2018: Ectopic GRHL2 Expression Due to Non-coding Mutations Promotes Cell State Transition and Causes Posterior Polymorphous Corneal Dystrophy 4. AMERICAN JOURNAL OF HUMAN GENETICS 102(3), p. 447 - 459, doi: 10.1016/j.ajhg.2018.02.002
• Kutilova, I; Janecko, N; Cejkova, D; Literak, I; Papagiannitsis, CC; Dolejska, M, 2018: Characterization of bla(KPC-3)-positive plasmids from an Enterobacter aerogenes isolated from a corvid in Canada. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY 73(9), p. 2573 - 2575, doi: 10.1093/jac/dky199
• Trizuljak, J; Kozubik, KS; Radova, L; Pesova, M; Pal, K; Reblova, K; Stehlikova, O; Smejkal, P; Zavrelova, J; Pacejka, M; Mayer, J; Pospisilova, S; Doubek, M, 2018: A novel germline mutation in GP1BA gene N-terminal domain in monoallelic Bernard-Soulier syndrome. PLATELETS 29(8), p. 827 - 833, doi: 10.1080/09537104.2018.1529300
• Kubesova, B; Pavlova, S; Malcikova, J; Kabathova, J; Radova, L; Tom, N; Tichy, B; Plevova, K; Kantorova, B; Fiedorova, K; Slavikova, M; Bystry, V; Kissova, J; Gisslinger, B; Gisslinger, H; Penka, M; Mayer, J; Kralovics, R; Pospisilova, S; Doubek, M, 2018: Low-burden TP53 mutations in chronic phase of myeloproliferative neoplasms: association with age, hydroxyurea administration, disease type and JAK2 mutational status. LEUKEMIA 32(2), p. 450 - 461, doi: 10.1038/leu.2017.230
• Brazdilova, K; Plevova, K; Francova, HS; Kockova, H; Borsky, M; Bikos, V; Malcikova, J; Oltova, A; Kotaskova, J; Tichy, B; Brychtova, Y; Mayer, J; Doubek, M; Pospisilova, S, 2018: Multiple productive IGH rearrangements denote oligoclonality even in immunophenotypically monoclonal CLL. LEUKEMIA 32(1), p. 234 - 236, doi: 10.1038/leu.2017.274

2017

• Tichy, L; Pavlouskova, J; Reblova, K; Freiberger, T; Vrablik, M; Fajkusova, L, 2017: AUTOSOMAL DOMINANT HYPERCHOLESTEROLEMIA IN THE CZECH REPUBLIC - INTRODUCTION OF THE NEXT GENERATION SEQUENCING. ATHEROSCLEROSIS 263, p. E26 - E26
• Brhelova, E; Antonova, M; Pardy, F; Kocmanova, I; Mayer, J; Racil, Z; Lengerova, M, 2017: Investigation of next-generation sequencing data of Klebsiella pneumoniae using web-based tools. JOURNAL OF MEDICAL MICROBIOLOGY 66(11), p. 1673 - 1683, doi: 10.1099/jmm.0.000624
• Drsata, T; Reblova, K; Besseova, I; Sponer, J; Lankas, F, 2017: rRNA C-Loops: Mechanical Properties of a Recurrent Structural Motif. JOURNAL OF CHEMICAL THEORY AND COMPUTATION 13(7), p. 3359 - 3371, doi: 10.1021/acs.jctc.7b00061
• Pal, K; Bystry, V; Reigl, T; Demko, M; Krejci, A; Touloumenidou, T; Stalika, E; Tichy, B; Ghia, P; Stamatopoulos, K; Pospisilova, S; Malcikova, J; Darzentas, N, 2017: GLASS: assisted and standardized assessment of gene variations from Sanger sequence trace data. BIOINFORMATICS 33(23), p. 3802 - 3804, doi: 10.1093/bioinformatics/btx423
• Plesingerova, H; Librova, Z; Plevova, K; Libra, A; Tichy, B; Francova, HS; Vrbacky, F; Smolej, L; Mayer, J; Bryja, V; Doubek, M; Pospisilova, S, 2017: COBLL1, LPL and ZAP70 expression defines prognostic subgroups of chronic lymphocytic leukemia patients with high accuracy and correlates with IGHV mutational status. LEUKEMIA & LYMPHOMA 58(1), p. 70 - 79, doi: 10.1080/10428194.2016.1180690
• Ruzicka, M; Kulhanek, P; Radova, L; Cechova, A; Spackova, N; Fajkusova, L; Reblova, K, 2017: DNA mutation motifs in the genes associated with inherited diseases. PLOS ONE 12(8), doi: 10.1371/journal.pone.0182377
• Pavlouskova, J; Reblova, K; Tichy, L; Freiberger, T; Fajkusova, L, 2017: FUNCTIONAL ANALYSIS OF MUTATIONS IN LDL RECEPTOR GENE. ATHEROSCLEROSIS 263, p. E221 - E221
• Pecimonova, M; Polak, E; Csicsay, F; Reblova, K; Stojiljkovic, M; Levarski, Z; Skultety, L; Kadasi, L; Soltysova, A, 2017: Functional and structural characterisation of 5 missense mutations of the phenylalanine hydroxylase. GENERAL PHYSIOLOGY AND BIOPHYSICS 36(4), p. 361 - 371, doi: 10.4149/gpb_2017003
• Belicky, S; Cernocka, H; Bertok, T; Holazova, A; Reblova, K; Palecek, E; Tkac, J; Ostatna, V, 2017: Label-free chronopotentiometric glycoprofiling of prostate specific antigen using sialic acid recognizing lectins. BIOELECTROCHEMISTRY 117, p. 89 - 94, doi: 10.1016/j.bioelechem.2017.06.005
• Bencurova, P; Baloun, J; Musilova, K; Radova, L; Tichy, B; Pail, M; Zeman, M; Brichtova, E; Hermanova, M; Pospisilova, S; Mraz, M; Brazdil, M, 2017: MicroRNA and mesial temporal lobe epilepsy with hippocampal sclerosis: Whole miRNome profiling of human hippocampus. EPILEPSIA 58(10), p. 1782 - 1793, doi: 10.1111/epi.13870

2016

• Kubesova, B; Pavlova, S; Malcikova, J; Kabathova, J; Radova, L; Tom, N; Tichy, B; Plevova, K; Kantorova, B; Fiedorova, K; Kissova, J; Gisslinger, B; Gisslinger, H; Mayer, J; Kralovics, R; Pospisilova, S; Doubek, M, 2016: Low-Burden TP53 Mutations Occur in Chronic Phase of Myeloproliferative Neoplasms Regardless of Hydroxyurea Administration, Disease Type, and JAK2 Status. BLOOD 128(22)
• Mareckov, A; Malcikova, J; Tom, N; Pal, K; Salek, D; Pospisilova, S; Trbusek, M, 2016: ATM GENE MUTATIONS REPRESENT A HALLMARK OF MANTLE CELL LYMPHOMA BUT DO NOT IMPACT PATIENTS´ SURVIVAL. HAEMATOLOGICA 101, p. 271 - 271
• Freiberger, T; Pavlouskova, J; Reblova, K; Tichy, L; Fajkusova, L, 2016: FUNCTIONAL ANALYSIS OF MUTATIONS LOCATED IN THE LDL RECEPTOR SIGNAL SEQUENCE CODING REGION. ATHEROSCLEROSIS 252, p. E43 - E43
• Pavlouskova, J; Reblova, K; Tichy, L; Freiberger, T; Fajkusova, L, 2016: Functional analysis of the p.(Leu15Pro) and p.(Gly20Arg) sequence changes in the signal sequence of LDL receptor. ATHEROSCLEROSIS 250, p. 9 - 14, doi: 10.1016/j.atherosclerosis.2016.04.022

2015

• Kantorova, B; Malcikova, J; Smardova, J; Pavlova, S; Trbusek, M; Tom, N; Plevova, K; Tichy, B; Truong, S; Diviskova, E; Kotaskova, J; Oltova, A; Patten, N; Brychtova, Y; Doubek, M; Mayer, J; Pospisilova, S, 2015: TP53 mutation analysis in chronic lymphocytic leukemia: comparison of different detection methods. TUMOR BIOLOGY 36(5), p. 3371 - 3380, doi: 10.1007/s13277-014-2971-0
• Malcikova, J; Stano-Kozubik, K; Tichy, B; Kantorova, B; Pavlova, S; Tom, N; Radova, L; Smardova, J; Pardy, F; Doubek, M; Brychtova, Y; Mraz, M; Plevova, K; Diviskova, E; Oltova, A; Mayer, J; Pospisilova, S; Trbusek, M, 2015: Detailed analysis of therapy-driven clonal evolution of TP53 mutations in chronic lymphocytic leukemia. LEUKEMIA 29(4), p. 877 - 885, doi: 10.1038/leu.2014.297
• Brazdilova, K; Plevova, K; Francova, HS; Kockova, H; Chmelikova, M; Borsky, M; Burckova, K; Kantorova, B; Tichy, B; Skabrahova, H; Brychtova, Y; Mayer, J; Doubek, M; Pospisilova, S, 2015: Single Cell Analysis of IG Genes in CLL: Cases with Multiple IGH Rearrangements Are Constituted of Several Independent Clones Even When Indistinguishable By Flow Cytometry. BLOOD 126(23)
• Tom, N; Malcikova, J; Radova, L; Kantorova, B; Pardy, F; Pavlova, S; Pal, K; Mraz, M; Tichy, B; Doubek, M; Brychtova, Y; Plevova, K; Mayer, J; Trbusek, M; Pospisilova, S, 2015: MUTATIONS IN THE TP53 GENE SHOW FEATURES OF SOMATIC HYPERMUTATION PROCESS WITH PROMINENT DIFFERENCE BETWEEN IGHV MUTATED AND UNMUTATED CHRONIC LYMPHOCYTIC LEUKEMIA. HAEMATOLOGICA 100, p. 224 - 225

2013

• KLEMENT, M.;D. SAFRANEK;T. DED;A. PEJZNOCH;L. NEDBAL;R. STEUER;J. CERVENY;S. MUELLER., 2013: A Comprehensive Web-based Platform For Domain-Specific Biological Models. ELECTRONIC NOTES IN THEORETICAL COMPUTER SCIENCE
• LOJA, T.;O. STEHLIKOVA;L. PALKO;K. VRBA;I. RAMPL;M. KLABUSAY., 2013: Influence of pulsed electromagnetic and pulsed vector magnetic potential field on the growth of tumor cells. ELECTROMAGNETIC BIOLOGY AND MEDICINE 33(3), p. 190 - 197
• Krejci, M; Doubek, M; Brychtova, Y; Stehlikova, O; Chovancova, J; Tichy, B; Francova, HS; Navratil, M; Tomiska, M; Horky, O; Pospisilova, S; Mayer, J, 2013: Fludarabine with cytarabine followed by reduced-intensity conditioning and allogeneic hematopoietic stem cell transplantation in patients with poor-risk chronic lymphocytic leukemia. ANNALS OF HEMATOLOGY 92(2), p. 249 - 254, doi: 10.1007/s00277-012-1579-y
• Khare, V; Lyakhovich, A; Dammann, K; Lang, M; Borgmann, M; Tichy, B; Pospisilova, S; Luciani, G; Campregher, C; Evstatiev, R; Pflueger, M; Hundsberger, H; Gasche, C, 2013: Mesalamine modulates intercellular adhesion through inhibition of p-21 activated kinase-1. BIOCHEMICAL PHARMACOLOGY 85(2), p. 234 - 244, doi: 10.1016/j.bcp.2012.10.026
• Mraz, M; Kozubik, KS; Plevova, K; Musilova, K; Tichy, B; Borsky, M; Kuglik, P; Doubek, M; Brychtova, Y; Mayer, J; Pospisilova, S, 2013: The origin of deletion 22q11 in chronic lymphocytic leukemia is related to the rearrangement of immunoglobulin lambda light chain locus. LEUKEMIA RESEARCH 37(7), p. 802 - 808, doi: 10.1016/j.leukres.2013.03.018
• Kaucka, M; Plevova, K; Pavlova, S; Janovska, P; Mishra, A; Verner, J; Prochazkova, J; Krejci, P; Kotaskova, J; Ovesna, P; Tichy, B; Brychtova, Y; Doubek, M; Kozubik, A; Mayer, J; Pospisilova, S; Bryja, V, 2013: The Planar Cell Polarity Pathway Drives Pathogenesis of Chronic Lymphocytic Leukemia by the Regulation of B-Lymphocyte Migration. CANCER RESEARCH 73(5), p. 1491 - 1501, doi: 10.1158/0008-5472CAN-12-1752

2012

• Kozubik, KS; Malcikova, J; Trbusek, M; Tom, N; Doubek, M; Brychtova, Y; Smardova, J; Mayer, J; Pospisilova, S; Tichy, B, 2012: Clonal Selection of TP53 Mutations in Chronic Lymphocytic Leukaemia Detected by Ultra-deep Pyrosequencing. EUROPEAN JOURNAL OF CANCER 48, p. S146 - S146
• Janikova, A; Mareckova, A; Dvorakova, D; Bortlicek, Z; Tichy, B; Navratil, M; Kral, Z; Pospisilova, S; Mayer, J, 2012: A real-time (PCR) for a real life ...? Quantitative evaluation of BCL2/IGH in follicular lymphoma and its implications for clinical practice. EXPERIMENTAL HEMATOLOGY 40(7), p. 528 - 539, doi: 10.1016/j.exphem.2012.02.005
• Kostareli, E; Gounari, M; Janus, A; Murray, F; Brochet, X; Giudicelli, V; Pospisilova, S; Oscier, D; Foroni, L; di Celle, PF; Tichy, B; Pedersen, LB; Jurlander, J; Ponzoni, M; Kouvatsi, A; Anagnostopoulos, A; Thompson, K; Darzentas, N; Lefranc, MP; Beless, 2012: Antigen receptor stereotypy across B-cell lymphoproliferations: the case of IGHV4-59/IGKV3-20 receptors with rheumatoid factor activity. LEUKEMIA 26(5), p. 1127 - 1131, doi: 10.1038/leu.2011.311
• Verner, J; Kabathova, J; Tomancova, A; Pavlova, S; Tichy, B; Mraz, M; Brychtova, Y; Krejci, M; Zdrahal, Z; Trbusek, M; Volejnikova, J; Sedlacek, P; Doubek, M; Mayer, J; Pospisilova, S, 2012: Gene expression profiling of acute graft-vs-host disease after hematopoietic stem cell transplantation. EXPERIMENTAL HEMATOLOGY 40(11), p. 899 - 905, doi: 10.1016/j.exphem.2012.06.011
• Mraz, M; Dolezalova, D; Plevova, K; Kozubik, KS; Mayerova, V; Cerna, K; Musilova, K; Tichy, B; Pavlova, S; Borsky, M; Verner, J; Doubek, M; Brychtova, Y; Trbusek, M; Hampl, A; Mayer, J; Pospisilova, S, 2012: MicroRNA-650 expression is influenced by immunoglobulin gene rearrangement and affects the biology of chronic lymphocytic leukemia. BLOOD 119(9), p. 2110 - 2113, doi: 10.1182/blood-2011-11-394874
• Doubek, M; Trbusek, M; Malcikova, J; Brychtova, Y; Smardova, J; Lochmanova, J; Panovska, A; Francova, HS; Mraz, M; Tichy, B; Sebejova, L; Navrkalova, V; Plevova, K; Kuglik, P; Mayer, J; Pospisilova, S, 2012: Specific p53 mutations do not impact results of alemtuzumab therapy among patients with chronic lymphocytic leukemia. LEUKEMIA & LYMPHOMA 53(9), p. 1817 - 1819, doi: 10.3109/10428194.2012.658794
• Agathangelidis, A; Darzentas, N; Hadzidimitriou, A; Brochet, X; Murray, F; Yan, XJ; Davis, Z; van Gastel-Mol, EJ; Tresoldi, C; Chu, CC; Cahill, N; Giudicelli, V; Tichy, B; Pedersen, LB; Foroni, L; Bonello, L; Janus, A; Smedby, K; Anagnostopoulos, A; Merle, 2012: Stereotyped B-cell receptors in one-third of chronic lymphocytic leukemia: a molecular classification with implications for targeted therapies. BLOOD 119(19), p. 4467 - 4475, doi: 10.1182/blood-2011-11-393694

2011

• Lochmanova, J; Mraz, M; Navrkalova, V; Dvorakova, B; Tichy, B; Plevova, K; Sebejova, L; Malcikova, J; Pavlova, S; Benes, V; Rausch, T; Brychtova, Y; Doubek, M; Trbusek, M; Mayer, J; Pospisilova, S, 2011: Mutational Analysis of Mir-29 Family Members in Chronic Lymphocytic Leukemia. BLOOD 118(21), p. 772 - 772
• Mraz, M; Plevova, K; Dolezalova, D; Stano-Kozubik, K; Mayerova, V; Cerna, K; Musilova, K; Pavlova, S; Tichy, B; Lochmanova, J; Doubek, M; Brychtova, Y; Trbusek, M; Hampl, A; Mayer, J; Pospisilova, S, 2011: The Regulation, Targets and Clinical Relevance of Microrna Mir-650 in Chronic Lymphocytic Leukemia (CLL). BLOOD 118(21), p. 1655 - 1656
• Janikova, A; Tichy, B; Supikova, J; Stano-Kozubik, K; Pospisilova, S; Kren, L; Vasova, I; Salek, D; Mayer, J, 2011: Gene expression profiling in follicular lymphoma and its implication for clinical practice. LEUKEMIA & LYMPHOMA 52(1), p. 59 - 68, doi: 10.3109/10428194.2010.531412

2010

• Redova, Martina; Chlapek, Petr; Loja, Tomas; Zitterbart, Karel; Hermanova, Marketa; Sterba, Jaroslav; Veselska, Renata, 2010: Influence of LOX/COX inhibitors on cell differentiation induced by all-trans retinoic acid in neuroblastoma cell lines. INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 25(2), p. 271 - 280
• Malcikova, J; Tichy, B; Damborsky, J; Kabathova, J; Trbusek, M; Mayer, J; Pospisilova, S, 2010: Analysis of the DNA-binding activity of p53 mutants using functional protein microarrays and its relationship to transcriptional activation. BIOLOGICAL CHEMISTRY 391(2 III), p. 197 - 205, doi: 10.1515/BC.2010.027
• Kotaskova, Jana; Tichy, Boris; Trbusek, Martin; Francova, Hana Skuhrova; Kabathova, Jitka; Malcikova, Jitka; Doubek, Michael; Brychtova, Yvona; Mayer, Jiri; Pospisilova, Sarka, 2010: High Expression of Lymphocyte-Activation Gene 3 (LAG3) in Chronic Lymphocytic Leukemia Cells Is Associated with Unmutated lmmunoglobulin Variable Heavy Chain Region (IGHV) Gene and Reduced Treatment-Free Survival. JOURNAL OF MOLECULAR DIAGNOSTICS 12(3), p. 328 - 334, doi: 10.2353/jmoldx.2010.090100

2009

• Mraz, Marek; Malinova, Karla; Pavlova, Sarka; Tichy, Boris; Kozubik, Katerina Stano; Malcikova, Jitka; Borsky, Marek; Verner, Jan; Doubek, Michael; Brychtova, Yvona; Trbusek, Martin; Mayer, Jiri; Pospisilova, Sarka, 2009: Detail Characterization of 22q11 Deletion and Mir-650 Role in CLL Patients. BLOOD 114(22), p. 507 - 508